Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AC092667.1-201ENST00000434301 2586 ntBASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AC026471.6-201ENST00000622954 1905 ntBASIC19.83■□□□□ 0.77
SATB2Q9UPW6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.83■□□□□ 0.77
SATB2Q9UPW6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SATB2Q9UPW6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SATB2Q9UPW6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SATB2Q9UPW6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 MIR4497-201ENST00000583208 89 ntBASIC19.8■□□□□ 0.76
SATB2Q9UPW6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SATB2Q9UPW6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 KRT18P68-201ENST00000392293 1000 ntBASIC19.79■□□□□ 0.76
SATB2Q9UPW6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.79■□□□□ 0.76
SATB2Q9UPW6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SATB2Q9UPW6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SATB2Q9UPW6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SATB2Q9UPW6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SATB2Q9UPW6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.78■□□□□ 0.76
SATB2Q9UPW6 SOX15-203ENST00000570788 1093 ntBASIC19.78■□□□□ 0.76
SATB2Q9UPW6 AC233263.1-201ENST00000578059 224 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms