Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTI1BQ9UEU0 SMG8-203ENST00000578922 2178 ntBASIC19.94■□□□□ 0.78
VTI1BQ9UEU0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTI1BQ9UEU0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.94■□□□□ 0.78
VTI1BQ9UEU0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTI1BQ9UEU0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTI1BQ9UEU0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 POU5F1P4-201ENST00000413175 1085 ntBASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTI1BQ9UEU0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 AL162430.1-201ENST00000480705 870 ntBASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 AC008175.2-201ENST00000612840 297 ntBASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 KRT87P-202ENST00000534226 1464 ntBASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
VTI1BQ9UEU0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 NTF6G-201ENST00000591094 616 ntBASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTI1BQ9UEU0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 KRT18P5-201ENST00000436075 1291 ntBASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VTI1BQ9UEU0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VTI1BQ9UEU0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
VTI1BQ9UEU0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.89■□□□□ 0.77
VTI1BQ9UEU0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms