Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LRIT1Q9P2V4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 MIR718-201ENST00000390190 70 ntBASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LRIT1Q9P2V4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRIT1Q9P2V4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 AC027702.1-201ENST00000563810 1770 ntBASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIT1Q9P2V4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms