Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SLC52A1Q9NWF4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 FAM197Y1-201ENST00000421178 764 ntBASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SLC52A1Q9NWF4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC29.33■■■□□ 2.29
SLC52A1Q9NWF4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
SLC52A1Q9NWF4 AC124283.5-201ENST00000624661 1809 ntBASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 AC092865.7-201ENST00000641832 219 ntBASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC29.31■■■□□ 2.28
SLC52A1Q9NWF4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 KRT8P36-201ENST00000489121 1440 ntBASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 RBM17P1-201ENST00000453646 1190 ntBASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 NUDT16P1-203ENST00000513809 620 ntBASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 AL121906.2-201ENST00000621597 723 ntBASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SLC52A1Q9NWF4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 KRT18P35-201ENST00000510488 1269 ntBASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
SLC52A1Q9NWF4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
SLC52A1Q9NWF4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SLC52A1Q9NWF4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC29.27■■■□□ 2.28
SLC52A1Q9NWF4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
SLC52A1Q9NWF4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
SLC52A1Q9NWF4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms