Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF4Q9NR80 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.28■■□□□ 1
ARHGEF4Q9NR80 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ARHGEF4Q9NR80 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.27■■□□□ 1
ARHGEF4Q9NR80 AC092667.1-201ENST00000434301 2586 ntBASIC21.27■□□□□ 0.99
ARHGEF4Q9NR80 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF4Q9NR80 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ARHGEF4Q9NR80 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 ESRRAP1-201ENST00000400596 1257 ntBASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ARHGEF4Q9NR80 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 KRT17P1-201ENST00000399211 1546 ntBASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 PRORSD1P-201ENST00000295112 541 ntBASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 AC100791.3-201ENST00000617619 330 ntBASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 AC007225.1-201ENST00000566331 1836 ntBASIC21.25■□□□□ 0.99
ARHGEF4Q9NR80 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 CYP2T3P-201ENST00000601990 817 ntBASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ARHGEF4Q9NR80 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ARHGEF4Q9NR80 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms