Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF304Q9HCX3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF304Q9HCX3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 AF106564.1-201ENST00000607058 2553 ntBASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 HLA-B-256ENST00000639848 1089 ntBASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF304Q9HCX3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ZNF304Q9HCX3 AC026310.3-201ENST00000625186 2373 ntBASIC19.27■□□□□ 0.67
ZNF304Q9HCX3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
ZNF304Q9HCX3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF304Q9HCX3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF304Q9HCX3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF304Q9HCX3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 C2orf69P4-201ENST00000565394 541 ntBASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 AC060766.5-201ENST00000590539 871 ntBASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF304Q9HCX3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 POU5F1P3-201ENST00000428824 1078 ntBASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 TMEM191A-211ENST00000637163 1067 ntBASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF304Q9HCX3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF304Q9HCX3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms