Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 AC131281.2-201ENST00000520478 145 ntBASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 AC087289.5-201ENST00000586076 3175 ntBASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 AC061975.6-201ENST00000579045 1553 ntBASIC18.76■□□□□ 0.59
ZNF556Q9HAH1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 EEF1DP3-203ENST00000566025 782 ntBASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF556Q9HAH1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF556Q9HAH1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 AC008175.2-201ENST00000612840 297 ntBASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF556Q9HAH1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF556Q9HAH1 UNC93B3-201ENST00000308076 687 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms