Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 KRT18P20-201ENST00000548986 1279 ntBASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 DUX4L16-201ENST00000555130 1264 ntBASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LIN28AQ9H9Z2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 RAP2CP1-201ENST00000605103 478 ntBASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIN28AQ9H9Z2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 AC026471.1-201ENST00000564629 3026 ntBASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 AC026185.1-201ENST00000445748 174 ntBASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIN28AQ9H9Z2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 POU5F1P4-201ENST00000413175 1085 ntBASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 AC010536.3-201ENST00000620306 533 ntBASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 AC120498.10-201ENST00000621827 505 ntBASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIN28AQ9H9Z2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN28AQ9H9Z2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN28AQ9H9Z2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LIN28AQ9H9Z2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN28AQ9H9Z2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LIN28AQ9H9Z2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms