Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRABDQ9H4I3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 RARRES2P11-201ENST00000635158 484 ntBASIC20.86■□□□□ 0.93
TRABDQ9H4I3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 AL162377.1-201ENST00000618844 1793 ntBASIC20.86■□□□□ 0.93
TRABDQ9H4I3 AL512408.1-201ENST00000569378 2000 ntBASIC20.86■□□□□ 0.93
TRABDQ9H4I3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRABDQ9H4I3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
TRABDQ9H4I3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRABDQ9H4I3 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.85■□□□□ 0.93
TRABDQ9H4I3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRABDQ9H4I3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRABDQ9H4I3 FP700111.2-201ENST00000619190 1892 ntBASIC20.83■□□□□ 0.92
TRABDQ9H4I3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRABDQ9H4I3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 AC010536.3-201ENST00000620306 533 ntBASIC20.82■□□□□ 0.92
TRABDQ9H4I3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRABDQ9H4I3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms