Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIPK3Q9H422 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIPK3Q9H422 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIPK3Q9H422 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIPK3Q9H422 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.33■■□□□ 1.17
HIPK3Q9H422 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.33■■□□□ 1.17
HIPK3Q9H422 AL121829.2-201ENST00000620908 328 ntBASIC22.33■■□□□ 1.17
HIPK3Q9H422 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HIPK3Q9H422 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.33■■□□□ 1.16
HIPK3Q9H422 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HIPK3Q9H422 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 ARMC10P1-201ENST00000313754 855 ntBASIC22.32■■□□□ 1.16
HIPK3Q9H422 AL353807.1-201ENST00000427475 662 ntBASIC22.32■■□□□ 1.16
HIPK3Q9H422 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 KRT16P5-201ENST00000455284 522 ntBASIC22.32■■□□□ 1.16
HIPK3Q9H422 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HIPK3Q9H422 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.32■■□□□ 1.16
HIPK3Q9H422 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.31■■□□□ 1.16
HIPK3Q9H422 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 FAM197Y1-201ENST00000421178 764 ntBASIC22.31■■□□□ 1.16
HIPK3Q9H422 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HIPK3Q9H422 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
HIPK3Q9H422 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.3■■□□□ 1.16
HIPK3Q9H422 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HIPK3Q9H422 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HIPK3Q9H422 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.29■■□□□ 1.16
HIPK3Q9H422 AL049597.2-201ENST00000565575 961 ntBASIC22.29■■□□□ 1.16
HIPK3Q9H422 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.29■■□□□ 1.16
HIPK3Q9H422 AC092865.7-201ENST00000641832 219 ntBASIC22.29■■□□□ 1.16
HIPK3Q9H422 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.29■■□□□ 1.16
HIPK3Q9H422 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HIPK3Q9H422 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.29■■□□□ 1.16
HIPK3Q9H422 NBPF21P-201ENST00000425093 1451 ntBASIC22.28■■□□□ 1.16
HIPK3Q9H422 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.28■■□□□ 1.16
HIPK3Q9H422 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIPK3Q9H422 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.28■■□□□ 1.16
HIPK3Q9H422 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIPK3Q9H422 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HIPK3Q9H422 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HIPK3Q9H422 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
HIPK3Q9H422 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.28■■□□□ 1.16
HIPK3Q9H422 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.28■■□□□ 1.16
HIPK3Q9H422 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms