Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 AL024507.2-201ENST00000606070 2574 ntBASIC21.34■■□□□ 1.01
ATXN3LQ9H3M9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 POM121L13P-201ENST00000422362 380 ntBASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 AC069544.1-201ENST00000609399 999 ntBASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 FEM1AP4-201ENST00000443167 1987 ntBASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATXN3LQ9H3M9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATXN3LQ9H3M9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATXN3LQ9H3M9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATXN3LQ9H3M9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATXN3LQ9H3M9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 AL596275.1-201ENST00000423464 877 ntBASIC21.32■■□□□ 1
ATXN3LQ9H3M9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 AC008550.1-201ENST00000511500 884 ntBASIC21.32■■□□□ 1
ATXN3LQ9H3M9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN3LQ9H3M9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN3LQ9H3M9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.3■■□□□ 1
ATXN3LQ9H3M9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms