Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
VPS16Q9H269 YBX1P1-201ENST00000445822 960 ntBASIC22.29■■□□□ 1.16
VPS16Q9H269 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.29■■□□□ 1.16
VPS16Q9H269 KRT18P20-201ENST00000548986 1279 ntBASIC22.29■■□□□ 1.16
VPS16Q9H269 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.29■■□□□ 1.16
VPS16Q9H269 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.29■■□□□ 1.16
VPS16Q9H269 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VPS16Q9H269 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS16Q9H269 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
VPS16Q9H269 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.28■■□□□ 1.16
VPS16Q9H269 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
VPS16Q9H269 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS16Q9H269 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
VPS16Q9H269 RBM17P2-201ENST00000616397 1405 ntBASIC22.28■■□□□ 1.16
VPS16Q9H269 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.28■■□□□ 1.16
VPS16Q9H269 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS16Q9H269 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS16Q9H269 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
VPS16Q9H269 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.28■■□□□ 1.16
VPS16Q9H269 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.28■■□□□ 1.16
VPS16Q9H269 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.27■■□□□ 1.16
VPS16Q9H269 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
VPS16Q9H269 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.27■■□□□ 1.16
VPS16Q9H269 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.27■■□□□ 1.16
VPS16Q9H269 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS16Q9H269 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
VPS16Q9H269 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.27■■□□□ 1.16
VPS16Q9H269 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
VPS16Q9H269 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.27■■□□□ 1.16
VPS16Q9H269 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.27■■□□□ 1.16
VPS16Q9H269 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
VPS16Q9H269 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
VPS16Q9H269 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.26■■□□□ 1.15
VPS16Q9H269 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.26■■□□□ 1.15
VPS16Q9H269 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.26■■□□□ 1.15
VPS16Q9H269 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.26■■□□□ 1.15
VPS16Q9H269 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
VPS16Q9H269 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.26■■□□□ 1.15
VPS16Q9H269 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.26■■□□□ 1.15
VPS16Q9H269 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS16Q9H269 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS16Q9H269 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS16Q9H269 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
VPS16Q9H269 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS16Q9H269 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS16Q9H269 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS16Q9H269 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
VPS16Q9H269 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS16Q9H269 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.24■■□□□ 1.15
VPS16Q9H269 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS16Q9H269 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS16Q9H269 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS16Q9H269 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
VPS16Q9H269 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS16Q9H269 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS16Q9H269 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS16Q9H269 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS16Q9H269 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
VPS16Q9H269 AC007322.3-201ENST00000426526 701 ntBASIC22.24■■□□□ 1.15
VPS16Q9H269 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.24■■□□□ 1.15
VPS16Q9H269 AC243732.1-201ENST00000612648 864 ntBASIC22.24■■□□□ 1.15
VPS16Q9H269 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
VPS16Q9H269 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms