Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX47Q9H0S4 KRT87P-202ENST00000534226 1464 ntBASIC21.13■□□□□ 0.97
DDX47Q9H0S4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX47Q9H0S4 KRT16P2-201ENST00000414673 1423 ntBASIC21.12■□□□□ 0.97
DDX47Q9H0S4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 AC131212.1-201ENST00000613771 668 ntBASIC21.12■□□□□ 0.97
DDX47Q9H0S4 AL355001.2-201ENST00000620617 1191 ntBASIC21.12■□□□□ 0.97
DDX47Q9H0S4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 AC098818.2-201ENST00000564925 2320 ntBASIC21.12■□□□□ 0.97
DDX47Q9H0S4 AC116050.2-201ENST00000612102 1779 ntBASIC21.12■□□□□ 0.97
DDX47Q9H0S4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX47Q9H0S4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 AC079140.4-201ENST00000507448 529 ntBASIC21.11■□□□□ 0.97
DDX47Q9H0S4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX47Q9H0S4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 AC018445.3-201ENST00000624177 1945 ntBASIC21.1■□□□□ 0.97
DDX47Q9H0S4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 AC091305.1-201ENST00000479476 895 ntBASIC21.1■□□□□ 0.97
DDX47Q9H0S4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 AC138907.5-202ENST00000569484 235 ntBASIC21.1■□□□□ 0.97
DDX47Q9H0S4 AL354811.1-201ENST00000610286 706 ntBASIC21.1■□□□□ 0.97
DDX47Q9H0S4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX47Q9H0S4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 AL136967.2-201ENST00000623968 743 ntBASIC21.09■□□□□ 0.97
DDX47Q9H0S4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX47Q9H0S4 AL691432.2-201ENST00000607222 2038 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms