Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 AC135279.3-201ENST00000610945 1311 ntBASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-1Q9BYR8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 TMEM179-206ENST00000616017 1645 ntBASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 AC012414.1-201ENST00000556676 535 ntBASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-1Q9BYR8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 AC008175.2-201ENST00000612840 297 ntBASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 AC116050.2-201ENST00000612102 1779 ntBASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-1Q9BYR8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC10.27□□□□□ -0.76
KRTAP3-1Q9BYR8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 KRT8P36-201ENST00000489121 1440 ntBASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms