Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 AC141257.4-201ENST00000634557 245 ntBASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 AC136944.6-201ENST00000634818 245 ntBASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL25A1Q9BXS0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 AL160237.2-201ENST00000556165 472 ntBASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.86■□□□□ 0.93
COL25A1Q9BXS0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 AC142086.6-201ENST00000621154 1765 ntBASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL25A1Q9BXS0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 AC244107.1-201ENST00000442033 332 ntBASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 AL031985.4-201ENST00000642138 673 ntBASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 KRT8P8-201ENST00000434750 1448 ntBASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL25A1Q9BXS0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 EMBP1-201ENST00000458200 901 ntBASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 AC097488.1-201ENST00000507834 756 ntBASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 DGCR10-201ENST00000609839 495 ntBASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 AL031432.5-201ENST00000641059 760 ntBASIC20.83■□□□□ 0.93
COL25A1Q9BXS0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL25A1Q9BXS0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL25A1Q9BXS0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL25A1Q9BXS0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL25A1Q9BXS0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL25A1Q9BXS0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms