Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AC092720.2-201ENST00000602388 1665 ntBASIC18.58■□□□□ 0.57
COPS4Q9BT78 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS4Q9BT78 AC110285.6-201ENST00000617652 491 ntBASIC18.58■□□□□ 0.56
COPS4Q9BT78 AL355001.2-201ENST00000620617 1191 ntBASIC18.58■□□□□ 0.56
COPS4Q9BT78 AC105233.4-201ENST00000642045 216 ntBASIC18.58■□□□□ 0.56
COPS4Q9BT78 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS4Q9BT78 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS4Q9BT78 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
COPS4Q9BT78 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPS4Q9BT78 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 AC125437.2-201ENST00000625180 2167 ntBASIC18.57■□□□□ 0.56
COPS4Q9BT78 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.57■□□□□ 0.56
COPS4Q9BT78 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 AC011484.1-201ENST00000377652 1995 ntBASIC18.57■□□□□ 0.56
COPS4Q9BT78 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS4Q9BT78 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 BX005040.4-201ENST00000637145 1518 ntBASIC18.56■□□□□ 0.56
COPS4Q9BT78 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 AF213884.3-201ENST00000563833 479 ntBASIC18.56■□□□□ 0.56
COPS4Q9BT78 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS4Q9BT78 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS4Q9BT78 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS4Q9BT78 AC009237.3-201ENST00000393279 1427 ntBASIC18.56■□□□□ 0.56
COPS4Q9BT78 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPS4Q9BT78 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS4Q9BT78 TNXA-203ENST00000507684 2038 ntBASIC18.56■□□□□ 0.56
COPS4Q9BT78 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.56■□□□□ 0.56
COPS4Q9BT78 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS4Q9BT78 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.55■□□□□ 0.56
COPS4Q9BT78 RASA4CP-201ENST00000424092 1398 ntBASIC18.55■□□□□ 0.56
COPS4Q9BT78 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.54■□□□□ 0.56
COPS4Q9BT78 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS4Q9BT78 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS4Q9BT78 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 AC091305.1-201ENST00000479476 895 ntBASIC18.54■□□□□ 0.56
COPS4Q9BT78 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COPS4Q9BT78 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS4Q9BT78 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms