Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 AL355472.2-201ENST00000422958 438 ntBASIC16.33■□□□□ 0.2
RITA1Q96K30 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.33■□□□□ 0.2
RITA1Q96K30 AC093787.1-201ENST00000450396 207 ntBASIC16.33■□□□□ 0.2
RITA1Q96K30 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.33■□□□□ 0.2
RITA1Q96K30 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.33■□□□□ 0.2
RITA1Q96K30 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 AL050303.2-201ENST00000619798 666 ntBASIC16.33■□□□□ 0.2
RITA1Q96K30 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RITA1Q96K30 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 SMG8-203ENST00000578922 2178 ntBASIC16.33■□□□□ 0.2
RITA1Q96K30 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RITA1Q96K30 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.33■□□□□ 0.2
RITA1Q96K30 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RITA1Q96K30 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RITA1Q96K30 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RITA1Q96K30 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.32■□□□□ 0.2
RITA1Q96K30 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RITA1Q96K30 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.32■□□□□ 0.2
RITA1Q96K30 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.32■□□□□ 0.2
RITA1Q96K30 AL162377.1-201ENST00000618844 1793 ntBASIC16.32■□□□□ 0.2
RITA1Q96K30 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RITA1Q96K30 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RITA1Q96K30 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RITA1Q96K30 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.31■□□□□ 0.2
RITA1Q96K30 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.31■□□□□ 0.2
RITA1Q96K30 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.31■□□□□ 0.2
RITA1Q96K30 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RITA1Q96K30 CROCCP5-201ENST00000436658 830 ntBASIC16.31■□□□□ 0.2
RITA1Q96K30 AC026185.1-201ENST00000445748 174 ntBASIC16.31■□□□□ 0.2
RITA1Q96K30 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.31■□□□□ 0.2
RITA1Q96K30 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.31■□□□□ 0.2
RITA1Q96K30 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
RITA1Q96K30 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RITA1Q96K30 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
RITA1Q96K30 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RITA1Q96K30 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RITA1Q96K30 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RITA1Q96K30 AC087633.2-202ENST00000565166 1439 ntBASIC16.3■□□□□ 0.2
RITA1Q96K30 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.3■□□□□ 0.2
RITA1Q96K30 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.3■□□□□ 0.2
RITA1Q96K30 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.3■□□□□ 0.2
RITA1Q96K30 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.3■□□□□ 0.2
RITA1Q96K30 AC069236.1-201ENST00000604339 616 ntBASIC16.3■□□□□ 0.2
RITA1Q96K30 AL356652.1-201ENST00000615962 565 ntBASIC16.3■□□□□ 0.2
RITA1Q96K30 AC008694.1-202ENST00000636953 945 ntBASIC16.3■□□□□ 0.2
RITA1Q96K30 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RITA1Q96K30 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.3■□□□□ 0.2
RITA1Q96K30 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.3■□□□□ 0.2
RITA1Q96K30 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms