Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
ITCHQ96J02 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
ITCHQ96J02 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ITCHQ96J02 SLC7A5P2-201ENST00000553010 536 ntBASIC19.31■□□□□ 0.68
ITCHQ96J02 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.31■□□□□ 0.68
ITCHQ96J02 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
ITCHQ96J02 AP001160.3-201ENST00000601484 763 ntBASIC19.31■□□□□ 0.68
ITCHQ96J02 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ITCHQ96J02 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
ITCHQ96J02 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.3■□□□□ 0.68
ITCHQ96J02 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ITCHQ96J02 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.3■□□□□ 0.68
ITCHQ96J02 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.3■□□□□ 0.68
ITCHQ96J02 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.3■□□□□ 0.68
ITCHQ96J02 AC104187.1-201ENST00000607510 612 ntBASIC19.3■□□□□ 0.68
ITCHQ96J02 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ITCHQ96J02 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.3■□□□□ 0.68
ITCHQ96J02 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ITCHQ96J02 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ITCHQ96J02 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ITCHQ96J02 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.29■□□□□ 0.68
ITCHQ96J02 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ITCHQ96J02 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.29■□□□□ 0.68
ITCHQ96J02 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ITCHQ96J02 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.29■□□□□ 0.68
ITCHQ96J02 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.29■□□□□ 0.68
ITCHQ96J02 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ITCHQ96J02 SMG8-203ENST00000578922 2178 ntBASIC19.29■□□□□ 0.68
ITCHQ96J02 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ITCHQ96J02 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.29■□□□□ 0.68
ITCHQ96J02 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ITCHQ96J02 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITCHQ96J02 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
ITCHQ96J02 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ITCHQ96J02 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
ITCHQ96J02 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITCHQ96J02 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ITCHQ96J02 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.28■□□□□ 0.68
ITCHQ96J02 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ITCHQ96J02 KRT18P20-201ENST00000548986 1279 ntBASIC19.28■□□□□ 0.68
ITCHQ96J02 CCDC92B-201ENST00000575506 885 ntBASIC19.28■□□□□ 0.68
ITCHQ96J02 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ITCHQ96J02 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITCHQ96J02 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITCHQ96J02 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ITCHQ96J02 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ITCHQ96J02 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.28■□□□□ 0.68
ITCHQ96J02 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.28■□□□□ 0.68
ITCHQ96J02 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ITCHQ96J02 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ITCHQ96J02 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 AC105265.2-201ENST00000467189 838 ntBASIC19.27■□□□□ 0.68
ITCHQ96J02 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.27■□□□□ 0.68
ITCHQ96J02 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.27■□□□□ 0.68
ITCHQ96J02 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.27■□□□□ 0.68
ITCHQ96J02 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.27■□□□□ 0.68
ITCHQ96J02 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.27■□□□□ 0.68
ITCHQ96J02 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ITCHQ96J02 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITCHQ96J02 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ITCHQ96J02 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITCHQ96J02 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ITCHQ96J02 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.27■□□□□ 0.67
ITCHQ96J02 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms