Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIPA1Q96FS4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 AC239809.2-201ENST00000415381 517 ntBASIC20.41■□□□□ 0.86
SIPA1Q96FS4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIPA1Q96FS4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 SNORA78-201ENST00000459373 127 ntBASIC20.4■□□□□ 0.86
SIPA1Q96FS4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 AC124016.1-201ENST00000609552 612 ntBASIC20.4■□□□□ 0.86
SIPA1Q96FS4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIPA1Q96FS4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SIPA1Q96FS4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SIPA1Q96FS4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.39■□□□□ 0.86
SIPA1Q96FS4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.39■□□□□ 0.86
SIPA1Q96FS4 AL117328.2-201ENST00000624617 1940 ntBASIC20.39■□□□□ 0.86
SIPA1Q96FS4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIPA1Q96FS4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 AC133681.1-201ENST00000465482 601 ntBASIC20.39■□□□□ 0.85
SIPA1Q96FS4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.39■□□□□ 0.85
SIPA1Q96FS4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.38■□□□□ 0.85
SIPA1Q96FS4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 Z98882.1-201ENST00000622160 2253 ntBASIC20.37■□□□□ 0.85
SIPA1Q96FS4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.37■□□□□ 0.85
SIPA1Q96FS4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms