Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APH1AQ96BI3 FP700111.2-201ENST00000619190 1892 ntBASIC18.01■□□□□ 0.47
APH1AQ96BI3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.01■□□□□ 0.47
APH1AQ96BI3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18■□□□□ 0.47
APH1AQ96BI3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
APH1AQ96BI3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18■□□□□ 0.47
APH1AQ96BI3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
APH1AQ96BI3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18■□□□□ 0.47
APH1AQ96BI3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
APH1AQ96BI3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18■□□□□ 0.47
APH1AQ96BI3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APH1AQ96BI3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APH1AQ96BI3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
APH1AQ96BI3 KRT8P36-201ENST00000489121 1440 ntBASIC17.99■□□□□ 0.47
APH1AQ96BI3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APH1AQ96BI3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APH1AQ96BI3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APH1AQ96BI3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APH1AQ96BI3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.99■□□□□ 0.47
APH1AQ96BI3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 MYC-209ENST00000641252 345 ntBASIC17.98■□□□□ 0.47
APH1AQ96BI3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
APH1AQ96BI3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APH1AQ96BI3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 AC007225.1-201ENST00000566331 1836 ntBASIC17.97■□□□□ 0.47
APH1AQ96BI3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
APH1AQ96BI3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APH1AQ96BI3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.96■□□□□ 0.47
APH1AQ96BI3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.96■□□□□ 0.47
APH1AQ96BI3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.96■□□□□ 0.47
APH1AQ96BI3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
APH1AQ96BI3 C2orf69P4-201ENST00000565394 541 ntBASIC17.96■□□□□ 0.47
APH1AQ96BI3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.96■□□□□ 0.47
APH1AQ96BI3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms