Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 SLC7A5P2-201ENST00000553010 536 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L2-201ENST00000561772 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L6-201ENST00000626483 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L1-201ENST00000627662 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L8-201ENST00000629013 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L3-201ENST00000630187 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L7-201ENST00000630678 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 DUX4L5-201ENST00000630834 1275 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 LINC02228-203ENST00000641970 1355 ntBASIC15.99■□□□□ 0.15
NPIPB3Q92617 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.99■□□□□ 0.15
NPIPB3Q92617 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 AC027612.3-201ENST00000413684 1047 ntBASIC15.98■□□□□ 0.15
NPIPB3Q92617 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 AC105265.2-201ENST00000467189 838 ntBASIC15.98■□□□□ 0.15
NPIPB3Q92617 SMG8-203ENST00000578922 2178 ntBASIC15.98■□□□□ 0.15
NPIPB3Q92617 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 AP001160.3-201ENST00000601484 763 ntBASIC15.98■□□□□ 0.15
NPIPB3Q92617 AC104187.1-201ENST00000607510 612 ntBASIC15.98■□□□□ 0.15
NPIPB3Q92617 AC005837.3-201ENST00000612163 286 ntBASIC15.98■□□□□ 0.15
NPIPB3Q92617 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPIPB3Q92617 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.98■□□□□ 0.15
NPIPB3Q92617 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 TCF3P1-201ENST00000423021 1937 ntBASIC15.97■□□□□ 0.15
NPIPB3Q92617 AC138932.1-201ENST00000534164 6830 ntBASIC15.97■□□□□ 0.15
NPIPB3Q92617 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPB3Q92617 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NPIPB3Q92617 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.96■□□□□ 0.15
NPIPB3Q92617 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPB3Q92617 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.96■□□□□ 0.15
NPIPB3Q92617 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.96■□□□□ 0.15
NPIPB3Q92617 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPB3Q92617 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPB3Q92617 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPB3Q92617 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPB3Q92617 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPB3Q92617 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPB3Q92617 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPB3Q92617 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPB3Q92617 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPB3Q92617 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPB3Q92617 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPB3Q92617 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms