Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AP003097.1-201ENST00000530657 1135 ntBASIC19.14■□□□□ 0.65
TM9SF4Q92544 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM9SF4Q92544 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.65
TM9SF4Q92544 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.13■□□□□ 0.65
TM9SF4Q92544 GCSHP5-201ENST00000443090 522 ntBASIC19.13■□□□□ 0.65
TM9SF4Q92544 AC128676.1-201ENST00000454392 318 ntBASIC19.13■□□□□ 0.65
TM9SF4Q92544 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF4Q92544 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TM9SF4Q92544 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.13■□□□□ 0.65
TM9SF4Q92544 AC142381.4-202ENST00000563973 229 ntBASIC19.13■□□□□ 0.65
TM9SF4Q92544 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.13■□□□□ 0.65
TM9SF4Q92544 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TM9SF4Q92544 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TM9SF4Q92544 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 AC091799.1-201ENST00000422823 811 ntBASIC19.12■□□□□ 0.65
TM9SF4Q92544 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 RPS2P52-201ENST00000469610 820 ntBASIC19.12■□□□□ 0.65
TM9SF4Q92544 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 CYP2T3P-201ENST00000601990 817 ntBASIC19.12■□□□□ 0.65
TM9SF4Q92544 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TM9SF4Q92544 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 LINC01006-201ENST00000333319 2292 ntBASIC19.12■□□□□ 0.65
TM9SF4Q92544 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM9SF4Q92544 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 AL158047.1-201ENST00000445918 881 ntBASIC19.11■□□□□ 0.65
TM9SF4Q92544 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 AC098590.1-201ENST00000468126 897 ntBASIC19.11■□□□□ 0.65
TM9SF4Q92544 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.11■□□□□ 0.65
TM9SF4Q92544 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM9SF4Q92544 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.1■□□□□ 0.65
TM9SF4Q92544 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM9SF4Q92544 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM9SF4Q92544 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM9SF4Q92544 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM9SF4Q92544 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM9SF4Q92544 MCRIP2P1-201ENST00000394346 511 ntBASIC19.09■□□□□ 0.65
TM9SF4Q92544 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 AC060766.5-201ENST00000590539 871 ntBASIC19.09■□□□□ 0.65
TM9SF4Q92544 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms