Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN4IP1Q8WWV3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 AC011484.1-201ENST00000377652 1995 ntBASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN4IP1Q8WWV3 AC087289.5-201ENST00000586076 3175 ntBASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN4IP1Q8WWV3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.02■□□□□ 0.32
RTN4IP1Q8WWV3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RTN4IP1Q8WWV3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 AC097381.1-201ENST00000429019 1296 ntBASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 AC138907.5-202ENST00000569484 235 ntBASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTN4IP1Q8WWV3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17■□□□□ 0.31
RTN4IP1Q8WWV3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms