Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
TMC1Q8TDI8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC28.26■■■□□ 2.12
TMC1Q8TDI8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
TMC1Q8TDI8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
TMC1Q8TDI8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TMC1Q8TDI8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AC011484.1-201ENST00000377652 1995 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 GCSHP5-201ENST00000443090 522 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AL158047.1-201ENST00000445918 881 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 SLC29A4P2-201ENST00000504749 1089 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 UNC93B4-201ENST00000505679 747 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AC093827.2-201ENST00000512654 315 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AL356652.1-201ENST00000615962 565 ntBASIC28.25■■■□□ 2.11
TMC1Q8TDI8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC28.25■■■□□ 2.11
TMC1Q8TDI8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 SOX15-203ENST00000570788 1093 ntBASIC28.24■■■□□ 2.11
TMC1Q8TDI8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TMC1Q8TDI8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 AC142381.4-202ENST00000563973 229 ntBASIC28.23■■■□□ 2.11
TMC1Q8TDI8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC28.23■■■□□ 2.11
TMC1Q8TDI8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TMC1Q8TDI8 PGM5P4-201ENST00000421970 445 ntBASIC28.22■■■□□ 2.11
TMC1Q8TDI8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.22■■■□□ 2.11
TMC1Q8TDI8 OR2A1-AS1-207ENST00000486094 819 ntBASIC28.22■■■□□ 2.11
TMC1Q8TDI8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC28.22■■■□□ 2.11
TMC1Q8TDI8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TMC1Q8TDI8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
TMC1Q8TDI8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TMC1Q8TDI8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.21■■■□□ 2.11
TMC1Q8TDI8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMC1Q8TDI8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TMC1Q8TDI8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC28.21■■■□□ 2.11
TMC1Q8TDI8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms