Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 AC022616.7-201ENST00000525383 220 ntBASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.83□□□□□ -0.19
ALMS1Q8TCU4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 KRT16P1-201ENST00000399124 1418 ntBASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 MESTP1-201ENST00000404287 994 ntBASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 AL031133.1-201ENST00000406807 723 ntBASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 AC026396.1-201ENST00000419388 421 ntBASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 AP005242.2-201ENST00000580065 1175 ntBASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ALMS1Q8TCU4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 NAPSB-206ENST00000562112 1266 ntBASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ALMS1Q8TCU4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 AC027702.1-201ENST00000563810 1770 ntBASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ALMS1Q8TCU4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 FAM8A6P-201ENST00000407496 1135 ntBASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 AL121829.2-201ENST00000620908 328 ntBASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ALMS1Q8TCU4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms