Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH19Q8TAB3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH19Q8TAB3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCDH19Q8TAB3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 AC007322.1-201ENST00000426983 750 ntBASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 AC006970.2-201ENST00000450065 779 ntBASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH19Q8TAB3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 AC099778.1-201ENST00000568593 1911 ntBASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 SMG8-203ENST00000578922 2178 ntBASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 CYP2T1P-201ENST00000432607 1285 ntBASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 AL356652.1-201ENST00000615962 565 ntBASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH19Q8TAB3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 CROCCP5-201ENST00000436658 830 ntBASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH19Q8TAB3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 AC112907.3-201ENST00000577781 2400 ntBASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH19Q8TAB3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms