Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01006Q8NI28 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 MIR1224-201ENST00000408193 85 ntBASIC15.87■□□□□ 0.13
LINC01006Q8NI28 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 AL121829.2-201ENST00000620908 328 ntBASIC15.87■□□□□ 0.13
LINC01006Q8NI28 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC01006Q8NI28 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 TSPY15P-201ENST00000457163 923 ntBASIC15.86■□□□□ 0.13
LINC01006Q8NI28 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 AC023632.3-201ENST00000521633 145 ntBASIC15.86■□□□□ 0.13
LINC01006Q8NI28 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC01006Q8NI28 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC01006Q8NI28 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms