Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.01■□□□□ 0.63
NUP43Q8NFH3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19■□□□□ 0.63
NUP43Q8NFH3 AC068338.2-201ENST00000563278 1430 ntBASIC19■□□□□ 0.63
NUP43Q8NFH3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NUP43Q8NFH3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19■□□□□ 0.63
NUP43Q8NFH3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19■□□□□ 0.63
NUP43Q8NFH3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 PGM5P4-201ENST00000421970 445 ntBASIC19■□□□□ 0.63
NUP43Q8NFH3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 AL162377.1-201ENST00000618844 1793 ntBASIC19■□□□□ 0.63
NUP43Q8NFH3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
NUP43Q8NFH3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19■□□□□ 0.63
NUP43Q8NFH3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19■□□□□ 0.63
NUP43Q8NFH3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19■□□□□ 0.63
NUP43Q8NFH3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19■□□□□ 0.63
NUP43Q8NFH3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19■□□□□ 0.63
NUP43Q8NFH3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NUP43Q8NFH3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP43Q8NFH3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NUP43Q8NFH3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.99■□□□□ 0.63
NUP43Q8NFH3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 AC231657.2-201ENST00000624556 255 ntBASIC18.99■□□□□ 0.63
NUP43Q8NFH3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP43Q8NFH3 AC087633.2-202ENST00000565166 1439 ntBASIC18.99■□□□□ 0.63
NUP43Q8NFH3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 AC007322.1-201ENST00000426983 750 ntBASIC18.98■□□□□ 0.63
NUP43Q8NFH3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 RARRES2P4-201ENST00000514074 484 ntBASIC18.98■□□□□ 0.63
NUP43Q8NFH3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 AL356652.1-201ENST00000615962 565 ntBASIC18.98■□□□□ 0.63
NUP43Q8NFH3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP43Q8NFH3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NUP43Q8NFH3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms