Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 AP000525.1-201ENST00000608286 694 ntBASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
LINC00116Q8NCU8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.95■■□□□ 1.75
LINC00116Q8NCU8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.95■■□□□ 1.75
LINC00116Q8NCU8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 AL353807.1-201ENST00000427475 662 ntBASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 REXO1L10P-201ENST00000615707 1290 ntBASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
LINC00116Q8NCU8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 AC073195.1-201ENST00000607241 877 ntBASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
LINC00116Q8NCU8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 NUDT16P1-203ENST00000513809 620 ntBASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 AC005363.2-201ENST00000618631 242 ntBASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 AL590326.2-201ENST00000625139 305 ntBASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.93■■□□□ 1.74
LINC00116Q8NCU8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.92■■□□□ 1.74
LINC00116Q8NCU8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LINC00116Q8NCU8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 KRT18P57-201ENST00000443599 1254 ntBASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 AC023632.3-201ENST00000521633 145 ntBASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LINC00116Q8NCU8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 MIR1238-201ENST00000408483 83 ntBASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.89■■□□□ 1.74
LINC00116Q8NCU8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.89■■□□□ 1.73
LINC00116Q8NCU8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.89■■□□□ 1.73
LINC00116Q8NCU8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms