Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 MCRIP2P1-201ENST00000394346 511 ntBASIC22.23■■□□□ 1.15
RDH13Q8NBN7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RDH13Q8NBN7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 AL512625.2-201ENST00000417533 625 ntBASIC22.21■■□□□ 1.15
RDH13Q8NBN7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 AL121832.2-201ENST00000610979 668 ntBASIC22.21■■□□□ 1.15
RDH13Q8NBN7 AC100791.3-201ENST00000617619 330 ntBASIC22.21■■□□□ 1.15
RDH13Q8NBN7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 AP005212.1-201ENST00000581547 1997 ntBASIC22.21■■□□□ 1.15
RDH13Q8NBN7 KRT8P36-201ENST00000489121 1440 ntBASIC22.21■■□□□ 1.15
RDH13Q8NBN7 AC087633.2-202ENST00000565166 1439 ntBASIC22.21■■□□□ 1.15
RDH13Q8NBN7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH13Q8NBN7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
RDH13Q8NBN7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 CYP2T3P-201ENST00000601990 817 ntBASIC22.2■■□□□ 1.14
RDH13Q8NBN7 AL356652.1-201ENST00000615962 565 ntBASIC22.2■■□□□ 1.14
RDH13Q8NBN7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 MKRN4P-201ENST00000444706 1521 ntBASIC22.2■■□□□ 1.14
RDH13Q8NBN7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.2■■□□□ 1.14
RDH13Q8NBN7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 KRT18P68-201ENST00000392293 1000 ntBASIC22.19■■□□□ 1.14
RDH13Q8NBN7 NCF1B-203ENST00000435988 1254 ntBASIC22.19■■□□□ 1.14
RDH13Q8NBN7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 AC020907.5-201ENST00000624372 1936 ntBASIC22.19■■□□□ 1.14
RDH13Q8NBN7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RDH13Q8NBN7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
RDH13Q8NBN7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.18■■□□□ 1.14
RDH13Q8NBN7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms