Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC005224.4-201ENST00000583262 1652 ntBASIC19.81■□□□□ 0.76
CPSF7Q8N684 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 KRT18P61-201ENST00000585825 1298 ntBASIC19.81■□□□□ 0.76
CPSF7Q8N684 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF7Q8N684 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.81■□□□□ 0.76
CPSF7Q8N684 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.8■□□□□ 0.76
CPSF7Q8N684 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF7Q8N684 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 AC018445.3-201ENST00000624177 1945 ntBASIC19.79■□□□□ 0.76
CPSF7Q8N684 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF7Q8N684 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.79■□□□□ 0.76
CPSF7Q8N684 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 AC125437.2-201ENST00000625180 2167 ntBASIC19.78■□□□□ 0.76
CPSF7Q8N684 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPSF7Q8N684 AP004607.4-201ENST00000530158 1459 ntBASIC19.78■□□□□ 0.76
CPSF7Q8N684 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CPSF7Q8N684 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPSF7Q8N684 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms