Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ARHGEF39Q8N4T4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF39Q8N4T4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 UNC93B5-201ENST00000530315 699 ntBASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 PTBP1P-201ENST00000554374 1601 ntBASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF39Q8N4T4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.19■□□□□ 0.66
ARHGEF39Q8N4T4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 PNMA6B-201ENST00000538162 1200 ntBASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.18■□□□□ 0.66
ARHGEF39Q8N4T4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 TSPY20P-201ENST00000450910 630 ntBASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 AC008403.3-201ENST00000598924 454 ntBASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ARHGEF39Q8N4T4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms