Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF2Q8N3S3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF2Q8N3S3 AC092368.3-202ENST00000574180 1591 ntBASIC21■□□□□ 0.95
PHTF2Q8N3S3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF2Q8N3S3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PHTF2Q8N3S3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF2Q8N3S3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PHTF2Q8N3S3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF2Q8N3S3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 AC087633.2-202ENST00000565166 1439 ntBASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.97■□□□□ 0.95
PHTF2Q8N3S3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 AP006294.2-201ENST00000641667 209 ntBASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF2Q8N3S3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms