Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2BBQ8N257 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 LINC01529-204ENST00000636474 1715 ntBASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2BBQ8N257 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 CHST11-202ENST00000546689 756 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 AC009086.3-201ENST00000623486 1008 ntBASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HIST3H2BBQ8N257 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST3H2BBQ8N257 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HIST3H2BBQ8N257 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.21■□□□□ 0.02
HIST3H2BBQ8N257 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.21■□□□□ 0.02
HIST3H2BBQ8N257 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST3H2BBQ8N257 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
HIST3H2BBQ8N257 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms