Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS52Q8N1B4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VPS52Q8N1B4 AC244015.2-201ENST00000616358 1861 ntBASIC22■■□□□ 1.11
VPS52Q8N1B4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22■■□□□ 1.11
VPS52Q8N1B4 AC116050.2-201ENST00000612102 1779 ntBASIC22■■□□□ 1.11
VPS52Q8N1B4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22■■□□□ 1.11
VPS52Q8N1B4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22■■□□□ 1.11
VPS52Q8N1B4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22■■□□□ 1.11
VPS52Q8N1B4 AC233263.1-201ENST00000578059 224 ntBASIC22■■□□□ 1.11
VPS52Q8N1B4 RN7SL471P-201ENST00000580476 299 ntBASIC22■■□□□ 1.11
VPS52Q8N1B4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 AC105020.6-201ENST00000621523 1217 ntBASIC22■■□□□ 1.11
VPS52Q8N1B4 SLC25A24-204ENST00000569674 2357 ntBASIC22■■□□□ 1.11
VPS52Q8N1B4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
VPS52Q8N1B4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
VPS52Q8N1B4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
VPS52Q8N1B4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
VPS52Q8N1B4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 MIR718-201ENST00000390190 70 ntBASIC21.97■■□□□ 1.11
VPS52Q8N1B4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 AC069544.1-201ENST00000609399 999 ntBASIC21.97■■□□□ 1.11
VPS52Q8N1B4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 AC026310.3-201ENST00000625186 2373 ntBASIC21.97■■□□□ 1.11
VPS52Q8N1B4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VPS52Q8N1B4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VPS52Q8N1B4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms