Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 FAM21FP-204ENST00000608637 956 ntBASIC20.08■□□□□ 0.81
CPNE9Q8IYJ1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.08■□□□□ 0.8
CPNE9Q8IYJ1 AL512408.1-201ENST00000569378 2000 ntBASIC20.08■□□□□ 0.8
CPNE9Q8IYJ1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE9Q8IYJ1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE9Q8IYJ1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE9Q8IYJ1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE9Q8IYJ1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE9Q8IYJ1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE9Q8IYJ1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 KRT8P36-201ENST00000489121 1440 ntBASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 AC068338.2-201ENST00000563278 1430 ntBASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms