Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 DUX4L16-201ENST00000555130 1264 ntBASIC25.21■■□□□ 1.63
SMC5Q8IY18 AC137761.2-201ENST00000561729 223 ntBASIC25.21■■□□□ 1.63
SMC5Q8IY18 AC145350.3-201ENST00000569033 163 ntBASIC25.21■■□□□ 1.63
SMC5Q8IY18 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.21■■□□□ 1.63
SMC5Q8IY18 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMC5Q8IY18 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SMC5Q8IY18 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SMC5Q8IY18 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
SMC5Q8IY18 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMC5Q8IY18 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMC5Q8IY18 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.2■■□□□ 1.62
SMC5Q8IY18 RARRES2P6-201ENST00000567333 442 ntBASIC25.2■■□□□ 1.62
SMC5Q8IY18 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMC5Q8IY18 AL356652.1-201ENST00000615962 565 ntBASIC25.2■■□□□ 1.62
SMC5Q8IY18 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMC5Q8IY18 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.2■■□□□ 1.62
SMC5Q8IY18 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMC5Q8IY18 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMC5Q8IY18 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMC5Q8IY18 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMC5Q8IY18 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMC5Q8IY18 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
SMC5Q8IY18 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.18■■□□□ 1.62
SMC5Q8IY18 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMC5Q8IY18 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SMC5Q8IY18 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.17■■□□□ 1.62
SMC5Q8IY18 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMC5Q8IY18 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SMC5Q8IY18 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SMC5Q8IY18 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.16■■□□□ 1.62
SMC5Q8IY18 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.16■■□□□ 1.62
SMC5Q8IY18 AC068338.2-201ENST00000563278 1430 ntBASIC25.16■■□□□ 1.62
SMC5Q8IY18 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.16■■□□□ 1.62
SMC5Q8IY18 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC25.16■■□□□ 1.62
SMC5Q8IY18 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMC5Q8IY18 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SMC5Q8IY18 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.15■■□□□ 1.62
SMC5Q8IY18 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.15■■□□□ 1.62
SMC5Q8IY18 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.15■■□□□ 1.62
SMC5Q8IY18 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 BX119927.1-201ENST00000636596 1552 ntBASIC25.15■■□□□ 1.62
SMC5Q8IY18 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 AC011767.1-201ENST00000617410 1153 ntBASIC25.15■■□□□ 1.62
SMC5Q8IY18 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMC5Q8IY18 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms