Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC00346Q8IVM7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 AC099778.1-201ENST00000568593 1911 ntBASIC17.96■□□□□ 0.47
LINC00346Q8IVM7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
LINC00346Q8IVM7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 SMG8-203ENST00000578922 2178 ntBASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00346Q8IVM7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 CDV3P1-201ENST00000471403 739 ntBASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00346Q8IVM7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 KRT18P5-201ENST00000436075 1291 ntBASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 AC137761.2-201ENST00000561729 223 ntBASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 AC145350.3-201ENST00000569033 163 ntBASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00346Q8IVM7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms