Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 AC055733.4-201ENST00000638462 1354 ntBASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 AC092720.2-201ENST00000602388 1665 ntBASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CRLF3Q8IUI8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 CCDC92B-201ENST00000575506 885 ntBASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 TCF3P1-201ENST00000423021 1937 ntBASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CRLF3Q8IUI8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.2■□□□□ 0.83
CRLF3Q8IUI8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CRLF3Q8IUI8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 LINC02228-203ENST00000641970 1355 ntBASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.19■□□□□ 0.82
CRLF3Q8IUI8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 KRT18P5-201ENST00000436075 1291 ntBASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CRLF3Q8IUI8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRLF3Q8IUI8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRLF3Q8IUI8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CRLF3Q8IUI8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRLF3Q8IUI8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CRLF3Q8IUI8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CRLF3Q8IUI8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms