Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL23A1Q86Y22 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL23A1Q86Y22 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.73■■□□□ 1.71
COL23A1Q86Y22 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL23A1Q86Y22 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL23A1Q86Y22 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL23A1Q86Y22 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.71■■□□□ 1.71
COL23A1Q86Y22 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.71■■□□□ 1.71
COL23A1Q86Y22 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL23A1Q86Y22 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL23A1Q86Y22 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 AL121894.2-201ENST00000602977 491 ntBASIC25.7■■□□□ 1.7
COL23A1Q86Y22 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 CR392000.1-201ENST00000624770 1228 ntBASIC25.7■■□□□ 1.7
COL23A1Q86Y22 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.7■■□□□ 1.7
COL23A1Q86Y22 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL23A1Q86Y22 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 AC004264.1-201ENST00000608354 794 ntBASIC25.68■■□□□ 1.7
COL23A1Q86Y22 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.68■■□□□ 1.7
COL23A1Q86Y22 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms