Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 KRT8P36-201ENST00000489121 1440 ntBASIC18.78■□□□□ 0.6
VRK2Q86Y07 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.78■□□□□ 0.6
VRK2Q86Y07 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.78■□□□□ 0.6
VRK2Q86Y07 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 TERF1P5-201ENST00000477545 1207 ntBASIC18.78■□□□□ 0.6
VRK2Q86Y07 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 AC010536.3-201ENST00000620306 533 ntBASIC18.78■□□□□ 0.6
VRK2Q86Y07 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.78■□□□□ 0.6
VRK2Q86Y07 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VRK2Q86Y07 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.77■□□□□ 0.6
VRK2Q86Y07 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.77■□□□□ 0.6
VRK2Q86Y07 KRT18P5-201ENST00000436075 1291 ntBASIC18.77■□□□□ 0.6
VRK2Q86Y07 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.77■□□□□ 0.6
VRK2Q86Y07 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.77■□□□□ 0.6
VRK2Q86Y07 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK2Q86Y07 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.77■□□□□ 0.59
VRK2Q86Y07 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VRK2Q86Y07 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VRK2Q86Y07 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.77■□□□□ 0.59
VRK2Q86Y07 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 AC137761.2-201ENST00000561729 223 ntBASIC18.76■□□□□ 0.59
VRK2Q86Y07 AC145350.3-201ENST00000569033 163 ntBASIC18.76■□□□□ 0.59
VRK2Q86Y07 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 FAM21FP-204ENST00000608637 956 ntBASIC18.76■□□□□ 0.59
VRK2Q86Y07 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.76■□□□□ 0.59
VRK2Q86Y07 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK2Q86Y07 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
VRK2Q86Y07 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK2Q86Y07 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VRK2Q86Y07 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VRK2Q86Y07 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.75■□□□□ 0.59
VRK2Q86Y07 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK2Q86Y07 AC026271.2-201ENST00000428091 497 ntBASIC18.75■□□□□ 0.59
VRK2Q86Y07 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK2Q86Y07 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.74■□□□□ 0.59
VRK2Q86Y07 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK2Q86Y07 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.74■□□□□ 0.59
VRK2Q86Y07 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms