Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC027702.1-201ENST00000563810 1770 ntBASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 YBX1P1-201ENST00000445822 960 ntBASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 AC104187.1-201ENST00000607510 612 ntBASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MRPL55Q7Z7F7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 NFIC-211ENST00000641145 8399 ntBASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
MRPL55Q7Z7F7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 TERF1P2-201ENST00000583350 1212 ntBASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 AP001160.3-201ENST00000601484 763 ntBASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 RARRES2P11-201ENST00000635158 484 ntBASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
MRPL55Q7Z7F7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 KRT18P20-201ENST00000548986 1279 ntBASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 CCDC92B-201ENST00000575506 885 ntBASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 AC116050.2-201ENST00000612102 1779 ntBASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MRPL55Q7Z7F7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms