Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP1BQ7LBR1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 AL162412.1-201ENST00000567129 965 ntBASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP1BQ7LBR1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 AL050303.2-201ENST00000619798 666 ntBASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP1BQ7LBR1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP1BQ7LBR1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP1BQ7LBR1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP1BQ7LBR1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.64■□□□□ 0.58
CHMP1BQ7LBR1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP1BQ7LBR1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP1BQ7LBR1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 AC007952.6-201ENST00000573168 2673 ntBASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 AC003957.1-201ENST00000625108 2673 ntBASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 MKRN4P-201ENST00000444706 1521 ntBASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP1BQ7LBR1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP1BQ7LBR1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms