Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDHR3Q6ZTQ4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 AP001160.3-201ENST00000601484 763 ntBASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.37■□□□□ 0.85
CDHR3Q6ZTQ4 AC125437.2-201ENST00000625180 2167 ntBASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 AC080038.1-201ENST00000611274 1154 ntBASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDHR3Q6ZTQ4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 AC087289.5-201ENST00000586076 3175 ntBASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDHR3Q6ZTQ4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 KRT18P11-201ENST00000435214 1283 ntBASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 AC138907.5-202ENST00000569484 235 ntBASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDHR3Q6ZTQ4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 AC010141.2-201ENST00000452426 721 ntBASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 UBE2DNL-204ENST00000602536 740 ntBASIC20.33■□□□□ 0.85
CDHR3Q6ZTQ4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms