Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 KRT16P5-201ENST00000455284 522 ntBASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 AC023632.3-201ENST00000521633 145 ntBASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 AC026471.5-201ENST00000615068 467 ntBASIC31.07■■■□□ 2.56
CDC42BPAQ5VT25 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDC42BPAQ5VT25 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDC42BPAQ5VT25 PTBP1P-201ENST00000554374 1601 ntBASIC31.06■■■□□ 2.56
CDC42BPAQ5VT25 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 AF186192.3-201ENST00000583427 947 ntBASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 AC233723.2-201ENST00000623798 2106 ntBASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDC42BPAQ5VT25 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 AP003071.4-201ENST00000562276 1284 ntBASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 TUB-203ENST00000534099 1759 ntTSL 2 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.04■■■□□ 2.56
CDC42BPAQ5VT25 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 KRT8P36-201ENST00000489121 1440 ntBASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC31.03■■■□□ 2.56
CDC42BPAQ5VT25 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 KRT8P9-201ENST00000558927 1449 ntBASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 AL353807.1-201ENST00000427475 662 ntBASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CDC42BPAQ5VT25 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.01■■■□□ 2.56
CDC42BPAQ5VT25 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.01■■■□□ 2.55
CDC42BPAQ5VT25 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CDC42BPAQ5VT25 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31■■■□□ 2.55
CDC42BPAQ5VT25 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31■■■□□ 2.55
CDC42BPAQ5VT25 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPAQ5VT25 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC31■■■□□ 2.55
CDC42BPAQ5VT25 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC30.99■■■□□ 2.55
CDC42BPAQ5VT25 CD177P1-201ENST00000606252 935 ntBASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms