Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HTR7P1-201ENST00000538670 1336 ntBASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.81□□□□□ -0.2
VPS13DQ5THJ4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 AP000525.1-201ENST00000608286 694 ntBASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13DQ5THJ4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 AC004264.1-201ENST00000608354 794 ntBASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 NBPF21P-201ENST00000425093 1451 ntBASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13DQ5THJ4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 AC005521.1-201ENST00000393351 872 ntBASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VPS13DQ5THJ4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.77□□□□□ -0.2
VPS13DQ5THJ4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VPS13DQ5THJ4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms