Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNFT1Q5M7Z0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 MIR2861-201ENST00000636310 90 ntBASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNFT1Q5M7Z0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 AL023875.1-201ENST00000640777 796 ntBASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.34■□□□□ 0.53
RNFT1Q5M7Z0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNFT1Q5M7Z0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RNFT1Q5M7Z0 KRT8P36-201ENST00000489121 1440 ntBASIC18.33■□□□□ 0.53
RNFT1Q5M7Z0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNFT1Q5M7Z0 AC121338.2-201ENST00000622535 1744 ntBASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 AL390719.1-204ENST00000412397 1219 ntBASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNFT1Q5M7Z0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.32■□□□□ 0.52
RNFT1Q5M7Z0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RNFT1Q5M7Z0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNFT1Q5M7Z0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNFT1Q5M7Z0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.32■□□□□ 0.52
RNFT1Q5M7Z0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms