Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VMA21Q3ZAQ7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 PGM5P4-201ENST00000421970 445 ntBASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 AC137761.2-201ENST00000561729 223 ntBASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 AC145350.3-201ENST00000569033 163 ntBASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 KRT18P61-201ENST00000585825 1298 ntBASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VMA21Q3ZAQ7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 AC087623.3-201ENST00000607047 1098 ntBASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VMA21Q3ZAQ7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 AL121603.2-201ENST00000557373 2117 ntBASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 TERF1P5-201ENST00000477545 1207 ntBASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 AC010536.3-201ENST00000620306 533 ntBASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
VMA21Q3ZAQ7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms