Protein–RNA interactions for Protein: Q0P6D6

CCDC15, Coiled-coil domain-containing protein 15, humanhuman

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15Q0P6D6 AP005212.1-201ENST00000581547 1997 ntBASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC15Q0P6D6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 GUSBP6-202ENST00000438529 1198 ntBASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 AL138781.1-201ENST00000566567 1274 ntBASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC15Q0P6D6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC15Q0P6D6 AL049796.1-201ENST00000565336 1766 ntBASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 AC026471.6-201ENST00000622954 1905 ntBASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC15Q0P6D6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 AC069152.1-201ENST00000438030 544 ntBASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 RARRES2P4-201ENST00000514074 484 ntBASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC15Q0P6D6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC15Q0P6D6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC15Q0P6D6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms