Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRPXP78539 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SRPXP78539 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SRPXP78539 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SRPXP78539 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.7■□□□□ 0.26
SRPXP78539 IGHV3-19-201ENST00000521488 291 ntBASIC16.7■□□□□ 0.26
SRPXP78539 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.7■□□□□ 0.26
SRPXP78539 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.7■□□□□ 0.26
SRPXP78539 TMEM179-206ENST00000616017 1645 ntBASIC16.7■□□□□ 0.26
SRPXP78539 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRPXP78539 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SRPXP78539 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.7■□□□□ 0.26
SRPXP78539 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SRPXP78539 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SRPXP78539 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.69■□□□□ 0.26
SRPXP78539 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.69■□□□□ 0.26
SRPXP78539 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.69■□□□□ 0.26
SRPXP78539 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
SRPXP78539 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SRPXP78539 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.69■□□□□ 0.26
SRPXP78539 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.69■□□□□ 0.26
SRPXP78539 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.69■□□□□ 0.26
SRPXP78539 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.69■□□□□ 0.26
SRPXP78539 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.69■□□□□ 0.26
SRPXP78539 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRPXP78539 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
SRPXP78539 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SRPXP78539 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.68■□□□□ 0.26
SRPXP78539 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.68■□□□□ 0.26
SRPXP78539 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.68■□□□□ 0.26
SRPXP78539 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SRPXP78539 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
SRPXP78539 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.68■□□□□ 0.26
SRPXP78539 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.68■□□□□ 0.26
SRPXP78539 POU5F1P4-201ENST00000413175 1085 ntBASIC16.68■□□□□ 0.26
SRPXP78539 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.68■□□□□ 0.26
SRPXP78539 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.68■□□□□ 0.26
SRPXP78539 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.68■□□□□ 0.26
SRPXP78539 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 AC008175.2-201ENST00000612840 297 ntBASIC16.68■□□□□ 0.26
SRPXP78539 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.68■□□□□ 0.26
SRPXP78539 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.68■□□□□ 0.26
SRPXP78539 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRPXP78539 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPXP78539 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPXP78539 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPXP78539 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.67■□□□□ 0.26
SRPXP78539 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRPXP78539 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPXP78539 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms